deeptools

deeptools 3.5.6 · pkgs/by-name/de/deeptools/package.nix

Health

Risk

risk 18 medium

+12 3.5.6 is behind upstream 4.0.0, a major release
+6 no maintainer

Version

3.5.6 upstream 4.0.0

Channels

master 3.5.6 · nixos-unstable 3.5.6 · nixos-26.05 3.5.6 no channel is behind master

Hydra

succeeded 2d ago

Advisories

none open

Packaging

meta complete

Packagewhat each field means

Description

Tools for exploring deep DNA sequencing data

Long description

deepTools contains useful modules to process the mapped reads data for multiple
quality checks, creating normalized coverage files in standard bedGraph and bigWig
file formats, that allow comparison between different files (for example, treatment and control).
Finally, using such normalized and standardized files, deepTools can create many
publication-ready visualizations to identify enrichments and for functional
annotations of the genome.

Homepage

https://deeptools.readthedocs.io/en/develop

License

MIT, BSD-3-Clause

Platforms

31 platforms: Linux, Darwin

Main program

deeptools

Source provenance

not set: built from source

Outputs

out dist