bowtie2

bowtie2 2.5.4 · pkgs/by-name/bo/bowtie2/package.nix

Health

Risk

risk 9 low

+8 2.5.4 is behind upstream 2.5.5
+1 no versionCheckHook

Version

2.5.4 2.5.5 available

Channels

master 2.5.4 · nixos-unstable 2.5.4 · nixos-26.05 2.5.4 no channel is behind master

Hydra

succeeded 2w ago

Advisories

none open

Packaging

no versionCheckHook

Packagewhat each field means

Description

Ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences

Homepage

http://bowtie-bio.sf.net/bowtie2

Changelog

https://github.com/BenLangmead/bowtie2/releases/tag/v2.5.4

License

GPL-3.0-or-later

Platforms

79 platforms: Linux, Darwin

Main program

bowtie2

Source provenance

not set: built from source

Outputs

out

Status

not broken, not insecure, free

Position

pkgs/by-name/bo/bowtie2/package.nix:64

Maintainers

rybern

Version bumps 0

all open bumps

None open. Upstream has 2.5.5: how to update a package.

Pull requests 1

various: hardcode finalAttrs.pname to strings draft

#498095 by guylamar2006 · opened 7mo ago · checks pass

Closed or merged in the last 60 days 2

[26.05] treewide: remove `optional cond [...]`

#561462 by mdaniels5757 · merged 4w ago

treewide: remove `optional cond [...]`

#560097 by booxter · merged 5w ago

Issues 0

None open.